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科研中的技能技巧

作者 
Skills in Scientific Researches 科研中的技能技巧
https://github.com/xuanleng/SiSR
或
https://gitee.com/xuanleng/SiSR
同步更新！gitee在国内访问更快些！

这是一份中文文档。主要记录我开启科研生涯以来学习的编程语言和技巧、Linux系统技巧、算法和科研心得等。
现在开放给大家，希望大家一起来记录自己所学，让后来者少走弯路。

冷轩
2020.02.16

域名购买：godaddy
个人用了很多年的，便宜可靠的，网站服务器推荐：https://my.laoxuehost.com/aff.php?aff=2994
其中7.5折扣码为：lxxl

This is a document in Chinese which mainly records my learning program language skills, Linux skills, Numerical methods, tips of my scientific research experience and so on.
Now the document is an open-source document. I hope we can record our learning experience to make younger avoid 
some mistakes.

XuanLeng
2020.02.16

2DES

作者
Two-Dimensional Electronic Spectroscopy
入行多年总结的专业笔记：二维电子光谱——理论、实验及应用上线了。
二维电子光谱-冷轩下载
  • 更新日志参见网页底部
  • 勾勒了大概轮廓，写的非常粗糙，而且还有很多内容没来得及更新！欢迎来信交流~~
  • 希望有更多的人参与到这个方向~~
下面是我们搭建的第一代二维电子光谱装置视频解说。（@ Prof. Yu-Xiang Weng‘s group.）
  • 2021.7.7 添加了郑元忠教授的教学视频链接，强烈推荐！
  • 2021.7.7 不定期更新
  • 2021.7.7 这里是文档“二维电子光谱”的更新日志

Xuan Leng’s Publications, Theses & Notes

作者

Publications

  1. Duc Viet Le,  Jessica M. de la Perrelle, Thanh Nhut Do, Xuan Leng, Patrick C. Tapping, Gregory D. Scholes, Tak W. Kee*, & Howe-Siang Tan*, Characterization of the ultrafast spectral diffusion and vibronic coherence of TIPS-pentacene using 2D electronic spectroscopy, J. Chem. Phys. 155, 014302, 2021
  2. Duc Viet Le, Xuan Leng, Howe-Siang Tan*, Regarding expressions of the oscillatory patterns in the 2D spectra of a displaced oscillator model, Chem. Phys. 2021, 111142
  3. Xuan Leng, Thanh Nhut Do, Parveen Akhtar, Hoang Long Nguyen, Petar Lambrev*, & Howe-Siang Tan*, Hierarchical Equations of Motion Simulation of Temperature-Dependent Two-Dimensional Electronic Spectroscopy of the Chlorophyll a Manifold in LHCII, Chemisty-An Asian Journal, 12, May, 2020
  4. Ruidan Zhu, Shuai Yue, Hao Li, Xuan Leng, Zhuan Wang, Hailong Chen & Yu-Xiang Weng*, Correction of spectral distortion in two-dimensional electronci spectroscopy arising from the wedge-based delay line, Opt. Express, 11(27), 15474-15484, 2019 5-oe-27-11-15474
  5. Xuan Leng, Ya-Ming Yan, Rui-Dan Zhu, Kai Song, Yu-Xiang Weng* & Qiang Shi*, Simulation of the two-dimensional electronic spectroscopy and energy transfer dynamics of light-harvesting complex II at ambient temperature, J. Phys. Chem. B, 122(17), 4642-4652, 2018 6-acs.jpcb.8b00674
  6. Shuai Yue, Zhuan Wang, Xuan Leng, Rui-Dan Zhu, Hai-Long Chen & Yu-Xiang Weng*, Coupling of multi-vibrational modes in bacteriochlorophyll a in solution observed with 2D electronic spectroscopy, Chem. Phys. Lett. 667, 79-86, 2017 4-1-s2.0-S000926141730249X-main
  7. Xuan Leng, Shuai Yue, Yu-Xiang Weng*, Kai Song & Qiang Shi*, Effects of finite laser pulse width on two-dimensional electronic spectroscopy, Chem. Phys. Lett., 667, 79-86, 2017 5-1-s2.0-S0009261416309198-main
  8. Xuan Leng & Xian-Ting Liang*, Redundancy of Fenna-Matthews-Olson for energy harvesting, Acta Photonica Sinica, 44(1),0117002, 2015 2-Fenna_Matthews_Olson
  9. Xuan Leng & Xian-Ting Liang*, Simulation of two-dimensional electronic spectra of phycoerythrin 545 at ambient temperature, J. Phys. Chem. B, 118 (43),12366–12370, 2014 1-jp506974r

Reviews

  1. 翁羽翔, 王专, 陈海龙, 冷轩 & 朱锐丹, 量子相干态的二维电子光谱测量的原理、应用和发展, 物理学报, 2018, 67, 1278012-review
  2. 冷轩, 王专 & 翁羽翔, 光合捕光天线系统的进化模式与能量传递, 植物生理学报, 52(11),1681-1691, 2016 3-1681-1691_16-1018

Theses

  • Ph.D. thesis: The applications of two-dimensional electronic spectroscopy in photosynthetic light-harvesting systems (二维电子光谱在光合捕光系统中的应用) UCASthesis-xuanleng
  • M. S. thesis: Theoretical study of energy transfer in photosynthesis light-harvesting systems(光合作用捕光系统中能量传输的研究)XuanLeng_Master_Thesis

Notes

  1. Notes on Quantum Mechanics.
  2. Notes on Redfield Equation.
  3. Exercises in Quantum Mechanics.

量子力学笔记（Notes on Quantum Mechanics）

作者
量子力学笔记—冷轩下载
更新日志：
  • 2021.9.15 移除了量子耗散动力学的内容，仅保留Redfiled理论作为附录，整体融入到新写的量子耗散动力学方法中。
  • 2021.9.15 阅读的人比较多了，实感挖坑不少，加入水印提醒。
  • 2021.9.15 调整了路径积分的内容。
  • 2021.7.7 考虑到两能级系统的重要性，将其单独成为一个大章节
  • 2021.7.7 首页增加了联动文档
  • 2021.7.7 事情太多，不定期更新，这里作为更新说明